Protein name:
Transcriptional repressor CTCF ;
Alternative:
CCCTC-binding factor ;11-zinc finger protein ;CTCFL paralog ;
Organism:
Human (Homo sapiens).
General Annotation
Sub Unit:
Interacts with CHD8.
Function:
Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates to the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X- inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.
Subcellular Location:
Nucleus
nucleoplasm
Chromosome
Chromosome
centromere
May translocate to the nucleolus upon cell differentiation. Associates with both centromeres and chromosomal arms during metaphase. Associates with the H19 ICR in mitotic chromosomes. May be preferentially excluded from heterochromatin during interphase.
Protein Attributes:
50:
MEGDAVEAIV | EESETFIKGK | ERKTYQRRRE | GGQEEDACHL | PQNQTDGGEV |
100:
VQDVNSSVQM | VMMEQLDPTL | LQMKTEVMEG | TVAPEAEAAV | DDTQIITLQV |
150:
VNMEEQPINI | GELQLVQVPV | PVTVPVATTS | VEELQGAYEN | EVSKEGLAES |
200:
EPMICHTLPL | PEGFQVVKVG | ANGEVETLEQ | GELPPQEDPS | WQKDPDYQPP |
250:
AKKTKKTKKS | KLRYTEEGKD | VDVSVYDFEE | EQQEGLLSEV | NAEKVVGNMK |
300:
PPKPTKIKKK | GVKKTFQCEL | CSYTCPRRSN | LDRHMKSHTD | ERPHKCHLCG |
350:
RAFRTVTLLR | NHLNTHTGTR | PHKCPDCDMA | FVTSGELVRH | RRYKHTHEKP |
400:
FKCSMCDYAS | VEVSKLKRHI | RSHTGERPFQ | CSLCSYASRD | TYKLKRHMRT |
450:
HSGEKPYECY | ICHARFTQSG | TMKMHILQKH | TENVAKFHCP | HCDTVIARKS |
500:
DLGVHLRKQH | SYIEQGKKCR | YCDAVFHERY | ALIQHQKSHK | NEKRFKCDQC |
550:
DYACRQERHM | IMHKRTHTGE | KPYACSHCDK | TFRQKQLLDM | HFKRYHDPNF |
600:
VPAAFVCSKC | GKTFTRRNTM | ARHADNCAGP | DGVEGENGGE | TKKSKRGRKR |
650:
KMRSKKEDSS | DSENAEPDLD | DNEDEEEPAV | EIEPEPEPQP | VTPAPPPAKK |
700:
RRGRPPGRTN | QPKQNQPTAI | IQVEDQNTGA | IENIIVEVKK | EPDAEPAEGE |
727:
EEEAQPAATD | APNGDLTPEM | ILSMMDR
Vaild Sequence:
Related Databases
Uniprot:
ELISA Kit
CLIA Kit
Polyclonal Antibody
Monoclonal Antibody
Protein
FOR
Mouse
Human
Rat
Chicken
ELISA Kit for Human Transcriptional repressor CTCF
ELISA Kit for Human Transcriptional repressor CTCF
ELISA Kit for Human Transcriptional repressor CTCF
ELISA Kit for Human Transcriptional repressor CTCF
CLIA Kit for Human Transcriptional repressor CTCF
CLIA Kit for Human Transcriptional repressor CTCF
CLIA Kit for Human Transcriptional repressor CTCF
CLIA Kit for Human Transcriptional repressor CTCF
Polyclonal Antibody for Human Transcriptional repressor CTCF
Polyclonal Antibody for Human Transcriptional repressor CTCF
Polyclonal Antibody for Human Transcriptional repressor CTCF
Polyclonal Antibody for Human Transcriptional repressor CTCF
Monoclonal Antibody for Human Transcriptional repressor CTCF
Monoclonal Antibody for Human Transcriptional repressor CTCF
Monoclonal Antibody for Human Transcriptional repressor CTCF
Monoclonal Antibody for Human Transcriptional repressor CTCF
Protein for Human Transcriptional repressor CTCF
Protein for Human Transcriptional repressor CTCF
Protein for Human Transcriptional repressor CTCF
Protein for Human Transcriptional repressor CTCF
R&D Technical Data
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Precision
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Recovery
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Linearity
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References
1.
"An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes."
Filippova G.N.
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Fagerlie S.
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Klenova E.M.
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Myers C.
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[
PubMed ]
[
Europe PMC ]
[
Abstract ]
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1);FUNCTION;SUBCELLULAR LOCATION
2.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [GENOMIC DNA];FUNCTION;TISSUE SPECIFICITY
3.
"Tumor-associated zinc finger mutations in the CTCF transcription factor selectively alter its DNA-binding specificity."
Filippova G.N.
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Qi C.-F.
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Ulmer J.E.
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Moore J.M.
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Ward M.D.
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Cancer Res.62:48-52(2002)
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PubMed ]
[
Europe PMC ]
[
Abstract ]
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [GENOMIC DNA];VARIANTS WILMS TUMOR TRP-339 AND GLN-448;VARIANT BREAST TUMOR GLU-344;VARIANT PROSTATE TUMOR ARG-345
4.
"Cloning of human full-length CDSs in BD Creator(TM) system donor vector."
Kalnine N.
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Submitted (2003-08) to the EMBL/GenBank/DDBJ databases
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1)
5.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2)
tissue :
Brain .
6.
"The sequence and analysis of duplication-rich human chromosome 16."
Martin J.
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Han C.
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Gordon L.A.
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Terry A.
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more...
Nature432:988-994(2004)
[
PubMed ]
[
Europe PMC ]
[
Abstract ]
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
7.
Mural R.J.
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Istrail S.
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more...
Submitted (2005-07) to the EMBL/GenBank/DDBJ databases
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
8.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1)
tissue :
Placenta .
9.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : PROTEIN SEQUENCE OF 471-479 AND 483-487;TRANSCRIPTIONAL ACTIVATION OF APP
10.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : REVIEW
11.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION
12.
"CTCF binding and higher order chromatin structure of the H19 locus are maintained in mitotic chromatin."
Burke L.J.
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Zhang R.
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Bartkuhn M.
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Tiwari V.K.
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Tavoosidana G.
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EMBO J.24:3291-3300(2005)
[
PubMed ]
[
Europe PMC ]
[
Abstract ]
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : SUBCELLULAR LOCATION;ASSOCIATION WITH H19 ICR
13.
"Targeting of CTCF to the nucleolus inhibits nucleolar transcription through a poly(ADP-ribosyl)ation-dependent mechanism."
Torrano V.
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Navascues J.
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J. Cell Sci.119:1746-1759(2006)
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PubMed ]
[
Europe PMC ]
[
Abstract ]
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : SUBCELLULAR LOCATION
14.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : INTERACTION WITH CHD8
15.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION
16.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION
17.
"DNA methyltransferase 1 and 3B activate BAG-1 expression via recruitment of CTCFL/BORIS and modulation of promoter histone methylation."
Sun L.
,
Huang L.
,
Nguyen P.
,
Bisht K.S.
,
Bar-Sela G.
,
Ho A.S.
,
Bradbury C.M.
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Yu W.
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Lee S.
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Gius D.
Cancer Res.68:2726-2735(2008)
[
PubMed ]
[
Europe PMC ]
[
Abstract ]
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION
18.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION
19.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION
20.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-374; SER-402; SER-609; SER-610 AND SER-612;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
tissue :
Cervix carcinoma .
21.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION;SUBCELLULAR LOCATION
22.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : FUNCTION
23.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
tissue :
Leukemic T-cell .
24.
[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
25.
"Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
Olsen J.V.
,
Vermeulen M.
,
Santamaria A.
,
Kumar C.
,
Miller M.L.
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Europe PMC ]
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Cited for : PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-289; THR-317; SER-609; SER-610 AND SER-612;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
tissue :
Cervix carcinoma .
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Cited for : IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
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[15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s)
Cited for : PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-609; SER-610 AND SER-612;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
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"N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB."
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Proc. Natl. Acad. Sci. U.S.A.109:12449-12454(2012)
[
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Europe PMC ]
[
Abstract ]
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Cited for : ACETYLATION [LARGE SCALE ANALYSIS] AT MET-1;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
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Cited for : STRUCTURE BY NMR OF 399-589
30.
"De novo mutations in the genome organizer CTCF cause intellectual disability."
Gregor A.
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Am. J. Hum. Genet.93:124-131(2013)
[
PubMed ]
[
Europe PMC ]
[
Abstract ]
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Cited for : VARIANT MRD21 TRP-567